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PathExpress

PathExpress

The Proteome of Seed Development in Legumes
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Genome Array

List of IdentifiersEnter or Paste:
Upload a file:

Example for Affymetrix ATH1 Genome Array

Compare to: Entire pathways
Sub-pathways
Enzyme Neighbourhoods | Depth

P-value threshold:
P-value adjustment: None
False Discovery Rate (FDR)
Bonferroni correction

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When using this tool, please cite:
- Goffard N, Weiller G. PathExpress: a web-based tool to identify relevant pathways in gene expression data. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W176-81. [PubMed]
-Dam S, Laursen BS, Ornfelt JH, Jochimsen B, Staerfeldt HH, Friis C, Nielsen K, Goffard N, Besenbacher S, Krusell L, Sato S, Tabata S, Thøgersen IB, Enghild JJ, Stougaard J. The proteome of seed development in the model legume Lotus japonicus. Plant Physiol. 2009 Mar;149(3):1325-40. [PubMed]
- Nautrup-Pedersen G, Dam S, Laursen BS, Siegumfeldt AL, Nielsen K, Goffard N, Stærfeldt HH, Friis C, Sato S, Tabata S, Lorentzen A, Roepstorff P, Stougaard J. Proteome analysis of pod and seed development in the model legume Lotus japonicus. J Proteome Res. 2010 Nov 5;9(11):5715-26. [PubMed]